JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1116.1 RBPJ Homo sapiens Rel CSL-related
MA1116.2 RBPJ Homo sapiens Rel CSL-related
MA1117.1 RELB Homo sapiens Rel NF-kappaB-related
MA1117.2 RELB Homo sapiens Rel NF-kappaB-related
MA1118.1 SIX1 Homo sapiens Homeo HD-SINE
MA1118.2 SIX1 Homo sapiens Homeo HD-SINE
MA1119.1 SIX2 Homo sapiens Homeo HD-SINE
MA1119.2 SIX2 Homo sapiens Homeo HD-SINE
MA1120.1 SOX13 Homo sapiens High-mobility SOX-related
MA1120.2 SOX13 Homo sapiens High-mobility SOX-related
Showing 10 profiles of page 219 from 428 pages

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Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.