Detailed information of matrix profile MA1120.1

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Profile summary
Name: SOX13
Matrix ID: MA1120.1
Class: High-mobility
Family: SOX-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 27521520
Uniprot ID: Q9UN79  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 1539 1795 4451 55 4329 4390 156 585 778 1228 1228 ]
C [ 663 958 22 4276 55 48 77 57 647 1257 1126 ]
G [ 1395 1049 40 60 50 63 28 3837 2666 1074 1046 ]
T [ 955 750 39 161 118 51 4291 73 461 993 1152 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1120.1 MA1120 1 SOX13 Homo sapiens
SOX-related High-mobility
MA1120.2 MA1120 2 SOX13 Homo sapiens
SOX-related High-mobility
     

-log(P-value) = 81.5785

TFFM details

TFFM ID: TFFM0586.1

ChIP-seq Centrality
-log(P-value): 27.038

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0586.1

ChIP-seq Centrality
-log(P-value): 340.13

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: