Detailed information of matrix profile MA1118.1

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Profile summary
Name: SIX1
Matrix ID: MA1118.1
Class: Homeo
Family: HD-SINE
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 9826681
Uniprot ID: Q15475  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 96 400 1049 1076 43 112 51 48 1070 146 546 ]
C [ 43 77 18 8 959 871 46 9 7 179 360 ]
G [ 859 90 6 10 12 31 30 1025 11 289 73 ]
T [ 110 541 35 14 94 94 981 26 20 494 129 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1118.1 MA1118 1 SIX1 Homo sapiens
HD-SINE Homeo
MA1118.2 MA1118 2 SIX1 Homo sapiens
HD-SINE Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: