Detailed information of matrix profile MA1116.1

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Profile summary
Name: RBPJ
Matrix ID: MA1116.1
Class: Rel
Family: CSL-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23651858
Uniprot ID: Q06330  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 345 489 2 35 9 7 2369 2382 742 565 ]
C [ 842 872 12 25 20 8 0 15 655 579 ]
G [ 604 787 2 2341 2313 2309 4 1 592 711 ]
T [ 611 254 2386 1 60 78 29 4 413 547 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1116.1 MA1116 1 RBPJ Homo sapiens
CSL-related Rel
MA1116.2 MA1116 2 RBPJ Homo sapiens
CSL-related Rel
     

-log(P-value) = 16.4968

TFFM details

TFFM ID: TFFM0149.1

ChIP-seq Centrality
-log(P-value): 2628.16

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0149.1

ChIP-seq Centrality
-log(P-value): 2754.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: