Detailed information of matrix profile MA1305.2

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Profile summary
Name: WRKY55
Matrix ID: MA1305.2
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9SHB5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 71 31 0 0 0 599 0 0 90 ]
C [ 415 2 0 0 0 0 599 128 72 ]
G [ 59 543 0 0 599 0 0 1 48 ]
T [ 54 23 599 599 0 0 0 470 389 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1305.1 MA1305 1 WRKY55 Arabidopsis thaliana
WRKY GCM
MA1305.2 MA1305 2 WRKY55 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: