Detailed information of matrix profile MA1005.2

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Profile summary
Name: ERF3
Matrix ID: MA1005.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: O80339  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 519 162 113 186 0 30 149 2 12 658 239 ]
C [ 229 1145 1713 8 1878 1844 2 1852 1852 48 887 ]
G [ 644 257 16 1658 3 1 1697 7 1 925 194 ]
T [ 491 319 41 31 2 8 35 22 18 252 563 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1005.1 MA1005 1 ERF3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1005.2 MA1005 2 ERF3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1005.3 MA1005 3 ERF082 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0333.2

ChIP-seq Centrality
-log(P-value): 495.944

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0333.2

ChIP-seq Centrality
-log(P-value): 496.348

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: