Detailed information of matrix profile MA1005.1

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Profile summary
Name: ERF3
Matrix ID: MA1005.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 9756931
Uniprot ID: O80339  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 80 14 0 0 14 57 79 581 ]
C [ 760 0 885 985 0 643 904 23 ]
G [ 80 985 114 14 985 186 0 279 ]
T [ 80 0 0 0 0 114 16 116 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1005.1 MA1005 1 ERF3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1005.2 MA1005 2 ERF3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1005.3 MA1005 3 ERF082 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0333.1

ChIP-seq Centrality
-log(P-value): 1520.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0333.1

ChIP-seq Centrality
-log(P-value): 1514.71

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: