Detailed information of matrix profile MA0976.2

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Profile summary
Name: CRF4
Matrix ID: MA0976.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9SUE3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 165 249 89 4 10 113 10 55 1104 67 331 612 ]
C [ 1167 1377 4 1865 1866 2 1794 1804 12 1659 1002 168 ]
G [ 247 111 1744 22 15 1734 9 16 653 40 198 757 ]
T [ 321 163 63 9 9 51 87 25 131 134 369 363 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0976.1 MA0976 1 CRF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0976.2 MA0976 2 CRF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0976.3 MA0976 3 CRF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0460.2

ChIP-seq Centrality
-log(P-value): 495.791

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0460.2

ChIP-seq Centrality
-log(P-value): 466.895

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: