Detailed information of matrix profile MA0976.1

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Profile summary
Name: CRF4
Matrix ID: MA0976.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 9756931
Uniprot ID: Q9SUE3  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 70 108 0 0 0 0 68 97 ]
C [ 326 769 0 974 1000 13 756 790 ]
G [ 535 62 1000 25 0 987 68 65 ]
T [ 70 62 0 0 0 0 108 49 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0976.1 MA0976 1 CRF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0976.2 MA0976 2 CRF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0976.3 MA0976 3 CRF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0460.1

ChIP-seq Centrality
-log(P-value): 451.421

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0460.1

ChIP-seq Centrality
-log(P-value): 515.647

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: