Detailed information of matrix profile MA0516.2

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Profile summary
Name: SP2
Matrix ID: MA0516.2
Class: C2H2
Family: Three-zinc
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 14726517
Uniprot ID: Q02086  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 256 53 613 753 54 34 14 16 4 82 0 5 23 402 22 109 150 ]
C [ 308 171 76 84 127 456 774 786 788 52 795 793 774 390 679 221 203 ]
G [ 123 57 0 33 791 8 1 13 22 780 0 26 0 22 1 0 88 ]
T [ 106 608 180 67 43 327 0 8 12 45 18 7 27 17 101 503 352 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0516.1 MA0516 1 SP2 Homo sapiens
Three-zinc C2H2
MA0516.2 MA0516 2 SP2 Homo sapiens
Three-zinc C2H2
MA0516.3 MA0516 3 SP2 Homo sapiens
Three-zinc C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0098.2

ChIP-seq Centrality
-log(P-value): 2381.67

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0098.2

ChIP-seq Centrality
-log(P-value): 2135.17

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: