Detailed information of matrix profile MA0516.1

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Profile summary
Name: SP2
Matrix ID: MA0516.1
Class: C2H2
Family: Three-zinc
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 22684502
Uniprot ID: Q02086  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 160 39 52 0 0 174 0 0 0 206 115 187 226 228 203 ]
C [ 253 811 1386 1679 1643 0 1686 1656 1108 1196 971 554 717 794 745 ]
G [ 1028 257 1 7 0 1280 0 0 0 0 99 325 401 408 422 ]
T [ 245 579 247 0 43 232 0 30 578 284 501 620 342 256 316 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0516.1 MA0516 1 SP2 Homo sapiens
Three-zinc C2H2
MA0516.2 MA0516 2 SP2 Homo sapiens
Three-zinc C2H2
MA0516.3 MA0516 3 SP2 Homo sapiens
Three-zinc C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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