Detailed information of matrix profile MA0516.1

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Profile summary
Name: SP2
Matrix ID: MA0516.1
Class: C2H2
Family: Three-zinc
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 22684502
Uniprot ID: Q02086  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 316 256 342 620 501 284 578 30 0 232 43 0 247 579 245 ]
C [ 422 408 401 325 99 0 0 0 0 1280 0 7 1 257 1028 ]
G [ 745 794 717 554 971 1196 1108 1656 1686 0 1643 1679 1386 811 253 ]
T [ 203 228 226 187 115 206 0 0 0 174 0 0 52 39 160 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0516.1 MA0516 1 SP2 Homo sapiens
Three-zinc C2H2
MA0516.2 MA0516 2 SP2 Homo sapiens
Three-zinc C2H2
MA0516.3 MA0516 3 SP2 Homo sapiens
Three-zinc C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: