JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0505.2 Nr5A2 Mus musculus Nuclear FTZF1related(NR5A)
MA0505.3 Nr5A2 Mus musculus Nuclear FTZF1related(NR5A)
MA0506.1 NRF1 Homo sapiens
MA0506.2 Nrf1 Mus musculus
MA0506.3 Nrf1 Mus musculus
MA0507.1 POU2F2 Homo sapiens Homeo POU
MA0507.2 POU2F2 Homo sapiens Homeo POU
MA0507.3 POU2F2 Homo sapiens Homeo POU
MA0508.1 PRDM1 Homo sapiens C2H2 More
MA0508.2 PRDM1 Homo sapiens C2H2 More
Showing 10 profiles of page 99 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.