JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1541.1 NR6A1 Homo sapiens Nuclear GCNF-related
MA1541.2 NR6A1 Homo sapiens Nuclear GCNF-related
MA1542.1 OSR1 Homo sapiens C2H2 Other
MA1542.2 OSR1 Homo sapiens C2H2 Other
MA1544.1 OVOL1 Homo sapiens C2H2 More
MA1544.2 OVOL1 Homo sapiens C2H2 More
MA1545.1 OVOL2 Homo sapiens C2H2 More
MA1545.2 OVOL2 Homo sapiens C2H2 More
MA1546.1 PAX3 Homo sapiens Paired Paired
MA1546.2 PAX3 Homo sapiens Paired Paired
Showing 10 profiles of page 296 from 428 pages

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Please select matrix profiles on the left side to add to your cart or perform the following analysis.


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Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.