Detailed information of matrix profile MA1542.1

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Profile summary
Name: OSR1
Matrix ID: MA1542.1
Class: C2H2
Family: Other
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 29084951
Uniprot ID: Q8TAX0  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1028 448 0 4 4890 10 0 62 407 1102 ]
C [ 1302 235 4890 99 83 4890 2103 4 612 545 ]
G [ 717 4890 0 0 38 0 5 4890 504 1512 ]
T [ 1843 17 18 4890 444 0 2787 24 4890 1731 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1542.1 MA1542 1 OSR1 Homo sapiens
Other C2H2
MA1542.2 MA1542 2 OSR1 Homo sapiens
Other C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0872.1

ChIP-seq Centrality
-log(P-value): 255.791

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0872.1

ChIP-seq Centrality
-log(P-value): 239.012

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: