Detailed information of matrix profile UN0850.1

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Profile summary

Name: AT5G60130
Matrix ID: UN0850.1
Class: B3
Family: REM
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LVG1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 154 800 954 64 51 987 974 870 819 303 561 161 877 922 70 129 1000 916 903 825 ]
C [ 77 12 12 0 780 0 6 25 25 264 129 64 19 0 0 561 0 6 6 0 ]
G [ 109 154 19 916 116 0 0 0 0 129 38 77 77 45 916 245 0 19 6 0 ]
T [ 658 32 12 19 51 12 19 103 154 303 270 696 25 32 12 64 0 58 83 174 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0850.1 UN0850 1 AT5G60130 Arabidopsis thaliana
REM B3
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: