Detailed information of matrix profile UN0850.1

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Profile summary

Name: AT5G60130
Matrix ID: UN0850.1
Class: B3
Family: REM
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LVG1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 174 83 58 0 64 12 32 25 696 270 303 154 103 19 12 51 19 12 32 658 ]
C [ 0 6 19 0 245 916 45 77 77 38 129 0 0 0 0 116 916 19 154 109 ]
G [ 0 6 6 0 561 0 0 19 64 129 264 25 25 6 0 780 0 12 12 77 ]
T [ 825 903 916 1000 129 70 922 877 161 561 303 819 870 974 987 51 64 954 800 154 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0850.1 UN0850 1 AT5G60130 Arabidopsis thaliana
REM B3
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: