Detailed information of matrix profile UN0715.1

  1. Home
  2. Matrix > UN0715.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: nhr-216
Matrix ID: UN0715.1
Class: Nuclear
Family: RXR-related
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q23038  
Source: 25905672
Comment:

Sequence logo

Frequency matrix

         
A [ 400 294 128 2 990 24 990 824 ]
C [ 59 1 25 992 2 10 1 33 ]
G [ 420 702 40 0 1 941 5 95 ]
T [ 119 2 806 4 4 23 2 46 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0715.1 UN0715 1 nhr-216 Caenorhabditis elegans
RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: