Detailed information of matrix profile UN0568.2

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Profile summary

Name: HOXD12::ETV1
Matrix ID: UN0568.2
Class: Homeo::Tryptophan
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P35452   P50549  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 3975 965 214 16 4 6296 6296 166 16 397 2452 5 6296 6296 6296 ]
C [ 492 4245 6296 16 0 8 100 0 21 4543 30 0 69 5 267 ]
G [ 2321 2051 64 6296 6296 11 0 6296 16 5 6296 9 10 7 14 ]
T [ 1193 132 2 5 10 2 476 5 6296 1351 24 6296 1140 43 140 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0568.1 UN0568 1 HOXD12::ETV1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
UN0568.2 UN0568 2 HOXD12::ETV1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: