Detailed information of matrix profile UN0568.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: HOXD12::ETV1
Matrix ID: UN0568.1
Class: Homeo::Tryptophan
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P35452   P50549  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1862 140 43 1140 6296 24 1351 6296 5 476 2 10 5 2 132 1193 ]
C [ 1356 14 7 10 9 6296 5 16 6296 0 11 6296 6296 64 2051 2321 ]
G [ 871 267 5 69 0 30 4543 21 0 100 8 0 16 6296 4245 492 ]
T [ 2207 6296 6296 6296 5 2452 397 16 166 6296 6296 4 16 214 965 3975 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0568.1 UN0568 1 HOXD12::ETV1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
UN0568.2 UN0568 2 HOXD12::ETV1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: