Detailed information of matrix profile UN0562.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: HOXB2::PAX5
Matrix ID: UN0562.1
Class: Homeo::Paired
Family: HOX::Paired
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14652   Q02548  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 202 103 2 205 13 886 13 75 11 295 30 49 886 73 17 886 307 ]
C [ 338 470 7 127 886 3 886 1 886 220 361 886 3 195 178 13 315 ]
G [ 165 185 886 14 10 17 0 886 295 128 2 185 200 105 2 467 258 ]
T [ 181 127 94 886 125 11 157 0 6 243 493 45 2 886 886 153 6 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0562.1 UN0562 1 HOXB2::PAX5 Homo sapiens
HOX::Paired Homeo::Paired
UN0562.2 UN0562 2 HOXB2::PAX5 Homo sapiens
HOX::Paired Homeo::Paired
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: