Detailed information of matrix profile UN0561.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: HOXB2::PAX1
Matrix ID: UN0561.1
Class: Homeo::Paired
Family: HOX::Paired
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14652   P15863  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2 1277 4076 4076 0 1 4076 1671 0 0 303 0 117 4076 45 210 1147 ]
C [ 824 1169 0 250 897 411 0 180 764 4076 6 0 11 0 4076 1182 808 ]
G [ 1438 9 122 604 1 4076 1948 1152 3306 0 4076 23 4076 41 6 2358 1590 ]
T [ 1811 1621 3 119 4076 46 39 1072 17 0 14 4076 11 150 8 326 531 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0561.1 UN0561 1 HOXB2::PAX1 Homo sapiens
HOX::Paired Homeo::Paired
UN0561.2 UN0561 2 HOXB2::PAX1 Homo sapiens
HOX::Paired Homeo::Paired
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: