Detailed information of matrix profile UN0561.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: HOXB2::PAX1
Matrix ID: UN0561.1
Class: Homeo::Paired
Family: HOX::Paired
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14652   P15863  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 531 326 8 150 11 4076 14 0 17 1072 39 46 4076 119 3 1621 1811 ]
C [ 1590 2358 6 41 4076 23 4076 0 3306 1152 1948 4076 1 604 122 9 1438 ]
G [ 808 1182 4076 0 11 0 6 4076 764 180 0 411 897 250 0 1169 824 ]
T [ 1147 210 45 4076 117 0 303 0 0 1671 4076 1 0 4076 4076 1277 2 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0561.1 UN0561 1 HOXB2::PAX1 Homo sapiens
HOX::Paired Homeo::Paired
UN0561.2 UN0561 2 HOXB2::PAX1 Homo sapiens
HOX::Paired Homeo::Paired
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: