Detailed information of matrix profile UN0560.2

  1. Home
  2. Matrix > UN0560.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXB2::ELK1
Matrix ID: UN0560.2
Class: Homeo::Tryptophan
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14652   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 353 16 38 2 0 2 5 10 0 291 467 30 20 467 ]
C [ 36 467 8 5 467 467 1 52 161 175 41 21 157 13 ]
G [ 80 72 12 3 0 0 467 467 15 110 76 37 29 27 ]
T [ 0 66 467 467 3 1 19 14 306 38 19 467 467 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0560.1 UN0560 1 HOXB2::ELK1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
UN0560.2 UN0560 2 HOXB2::ELK1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: