Detailed information of matrix profile UN0560.2

  1. Home
  2. Matrix > UN0560.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXB2::ELK1
Matrix ID: UN0560.2
Class: Homeo::Tryptophan
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14652   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 27 467 467 19 38 306 14 19 1 3 467 467 66 0 ]
C [ 27 29 37 76 110 15 467 467 0 0 3 12 72 80 ]
G [ 13 157 21 41 175 161 52 1 467 467 5 8 467 36 ]
T [ 467 20 30 467 291 0 10 5 2 0 2 38 16 353 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0560.1 UN0560 1 HOXB2::ELK1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
UN0560.2 UN0560 2 HOXB2::ELK1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: