Detailed information of matrix profile UN0555.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: GCM2::TBX21
Matrix ID: UN0555.1
Class: GCM::T-Box
Family: GCM::TBrain-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O75603   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2043 39 40 227 653 65 2416 29 384 4220 0 4220 0 805 1207 ]
C [ 461 4220 4220 4220 2379 4220 11 1556 959 439 4220 351 4220 4220 723 ]
G [ 1076 31 7 47 1842 173 25 35 2552 87 18 33 0 152 244 ]
T [ 640 225 23 124 583 1077 1768 2600 325 731 233 0 86 553 4220 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0555.1 UN0555 1 GCM2::TBX21 Homo sapiens
GCM::TBrain-related GCM::T-Box
UN0555.2 UN0555 2 GCM2::TBX21 Homo sapiens
GCM::TBrain-related GCM::T-Box
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: