Detailed information of matrix profile UN0555.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: GCM2::TBX21
Matrix ID: UN0555.1
Class: GCM::T-Box
Family: GCM::TBrain-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O75603   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 4220 553 86 0 233 731 325 2600 1768 1077 583 124 23 225 640 ]
C [ 244 152 0 33 18 87 2552 35 25 173 1842 47 7 31 1076 ]
G [ 723 4220 4220 351 4220 439 959 1556 11 4220 2379 4220 4220 4220 461 ]
T [ 1207 805 0 4220 0 4220 384 29 2416 65 653 227 40 39 2043 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0555.1 UN0555 1 GCM2::TBX21 Homo sapiens
GCM::TBrain-related GCM::T-Box
UN0555.2 UN0555 2 GCM2::TBX21 Homo sapiens
GCM::TBrain-related GCM::T-Box
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: