Detailed information of matrix profile UN0549.2

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Profile summary

Name: GCM1::SOX2
Matrix ID: UN0549.2
Class: GCM::High-mobility
Family: GCM::SOX-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P48431   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 434 636 1 636 636 24 179 48 279 12 0 13 103 3 636 1 ]
C [ 202 6 636 34 49 5 15 216 26 636 636 636 97 433 15 155 ]
G [ 150 5 21 0 29 18 408 175 245 0 8 10 540 1 8 16 ]
T [ 59 0 13 2 15 636 34 197 86 0 0 14 7 203 2 481 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0549.1 UN0549 1 GCM1::SOX2 Homo sapiens
GCM::SOX-related GCM::High-mobility
UN0549.2 UN0549 2 GCM1::SOX2 Homo sapiens
GCM::SOX-related GCM::High-mobility
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: