Detailed information of matrix profile UN0549.1

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Profile summary

Name: GCM1::SOX2
Matrix ID: UN0549.1
Class: GCM::High-mobility
Family: GCM::SOX-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P48431   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 481 2 203 7 14 0 0 86 197 34 636 15 2 13 0 59 95 ]
C [ 16 8 1 540 10 8 0 245 175 408 18 29 0 21 5 150 343 ]
G [ 155 15 433 97 636 636 636 26 216 15 5 49 34 636 6 202 83 ]
T [ 1 636 3 103 13 0 12 279 48 179 24 636 636 1 636 434 293 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0549.1 UN0549 1 GCM1::SOX2 Homo sapiens
GCM::SOX-related GCM::High-mobility
UN0549.2 UN0549 2 GCM1::SOX2 Homo sapiens
GCM::SOX-related GCM::High-mobility
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: