Detailed information of matrix profile UN0543.1

  1. Home
  2. Matrix > UN0543.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: GCM1::ELK3
Matrix ID: UN0543.1
Class: GCM::Tryptophan
Family: GCM::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P41971   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1376 40 411 172 25 1 0 82 8 72 2119 2026 227 154 481 ]
C [ 104 72 61 1953 5 49 0 2118 21 9 87 97 46 423 109 ]
G [ 653 128 2056 339 2091 2123 2127 56 2120 2111 162 198 2040 399 1177 ]
T [ 28 2060 15 294 15 0 0 57 27 66 109 227 22 1893 355 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0542.1 UN0542 1 GCM1::ELK3 Homo sapiens
GCM::Ets-related GCM::Tryptophan
UN0543.1 UN0543 1 GCM1::ELK3 Homo sapiens
GCM::Ets-related GCM::Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: