Detailed information of matrix profile UN0516.1

  1. Home
  2. Matrix > UN0516.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ETV2::FOXO6
Matrix ID: UN0516.1
Class: Tryptophan::Fork
Family: Ets-related::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: A8MYZ6   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 2389 595 267 1 4 3841 1424 133 206 628 595 1821 158 ]
C [ 327 3841 3841 9 1 20 51 3 572 336 194 699 1575 ]
G [ 1453 743 60 3841 3841 0 14 3841 197 785 1826 638 818 ]
T [ 731 358 0 8 96 173 3841 106 3841 3841 2016 2020 1290 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0516.1 UN0516 1 ETV2::FOXO6 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0516.2 UN0516 2 ETV2::FOXO6 Homo sapiens
Ets-related::FOX Tryptophan::Fork
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: