Detailed information of matrix profile UN0514.1

  1. Home
  2. Matrix > UN0514.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ETV2::FOXI1
Matrix ID: UN0514.1
Class: Tryptophan::Fork
Family: Ets-related::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q12951   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 6419 1927 507 63 17 11255 3062 268 0 961 1477 5683 ]
C [ 836 8707 11255 3 20 33 64 6 171 383 151 1599 ]
G [ 4836 2548 238 11255 11255 3 41 11255 6 2277 6548 1393 ]
T [ 2051 659 57 15 82 56 11255 7 11255 11255 4707 5572 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0513.1 UN0513 1 ETV2::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0514.1 UN0514 1 ETV2::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0515.1 UN0515 1 ETV2::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0513.2 UN0513 2 ETV2::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0514.2 UN0514 2 ETV2::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0515.2 UN0515 2 ETV2::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: