Detailed information of matrix profile UN0499.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: ELK1::ONECUT2
Matrix ID: UN0499.1
Class: Tryptophan::Homeo
Family: Ets-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95948   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 468 126 44 0 4 773 781 20 94 71 589 33 29 164 769 91 560 240 ]
C [ 92 610 776 2 11 4 4 448 439 25 35 15 781 38 15 31 183 278 ]
G [ 272 118 26 785 785 5 7 335 134 769 174 20 33 733 64 20 249 144 ]
T [ 78 9 4 5 9 25 37 9 117 27 30 785 25 43 55 760 134 122 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0499.1 UN0499 1 ELK1::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan::Homeo
UN0499.2 UN0499 2 ELK1::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan::Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: