Detailed information of matrix profile UN0496.2

  1. Home
  2. Matrix > UN0496.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ELK1::FOXI1
Matrix ID: UN0496.2
Class: Tryptophan::Fork
Family: Ets-related::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P19419   Q12951  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 4184 278 681 16 0 5129 5129 1351 146 2269 545 3108 5129 5129 10 5129 ]
C [ 160 3473 5129 98 28 13 0 457 1105 40 428 2021 788 66 3868 104 ]
G [ 945 1656 14 5129 5129 0 0 3305 24 2860 260 0 20 479 0 84 ]
T [ 802 237 9 1 10 32 193 16 3854 58 5129 12 456 127 1260 493 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0496.1 UN0496 1 ELK1::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0497.1 UN0497 1 ELK1::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
UN0496.2 UN0496 2 ELK1::FOXI1 Homo sapiens
Ets-related::FOX Tryptophan::Fork
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: