Detailed information of matrix profile UN0488.2

  1. Home
  2. Matrix > UN0488.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: CUX1::TBX21
Matrix ID: UN0488.2
Class: Homeo::T-Box
Family: HD-CUT::TBrain-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P39880   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 379 233 1327 0 1327 58 52 87 1327 1327 42 ]
C [ 324 1093 59 1327 16 1327 1327 853 180 29 37 ]
G [ 23 200 395 0 331 2 96 0 613 97 0 ]
T [ 1327 30 119 0 0 19 64 473 329 99 1327 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0488.1 UN0488 1 CUX1::TBX21 Homo sapiens
HD-CUT::TBrain-related Homeo::T-Box
UN0488.2 UN0488 2 CUX1::TBX21 Homo sapiens
HD-CUT::TBrain-related Homeo::T-Box
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: