Detailed information of matrix profile UN0488.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: CUX1::TBX21
Matrix ID: UN0488.1
Class: Homeo::T-Box
Family: HD-CUT::TBrain-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P39880   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 522 1327 99 329 473 64 19 0 0 119 30 1327 ]
C [ 373 0 97 613 0 96 2 331 0 395 200 23 ]
G [ 518 37 29 180 853 1327 1327 16 1327 59 1093 324 ]
T [ 1327 42 1327 1327 87 52 58 1327 0 1327 233 379 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0488.1 UN0488 1 CUX1::TBX21 Homo sapiens
HD-CUT::TBrain-related Homeo::T-Box
UN0488.2 UN0488 2 CUX1::TBX21 Homo sapiens
HD-CUT::TBrain-related Homeo::T-Box
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: