Detailed information of matrix profile UN0480.1

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Profile summary

Name: ZF-C2H2-6
Matrix ID: UN0480.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H1  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 247 318 259 268 336 320 195 95 52 19 44 888 897 33 49 527 740 336 196 231 261 344 ]
C [ 210 197 198 182 146 185 226 22 75 23 819 83 53 178 197 191 49 172 237 169 193 177 ]
G [ 274 257 313 264 222 277 252 838 21 16 38 18 25 28 33 164 131 242 158 236 244 141 ]
T [ 270 227 230 286 297 219 327 45 853 943 99 11 25 761 721 118 80 250 409 364 303 338 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0480.1 UN0480 1 ZF-C2H2-6 Ciona intestinalis
C2H2
UN0480.2 UN0480 2 ZF-C2H2-6 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: