Detailed information of matrix profile UN0480.1

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Profile summary

Name: ZF-C2H2-6
Matrix ID: UN0480.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H1  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 338 303 364 409 250 80 118 721 761 25 11 99 943 853 45 327 219 297 286 230 227 270 ]
C [ 141 244 236 158 242 131 164 33 28 25 18 38 16 21 838 252 277 222 264 313 257 274 ]
G [ 177 193 169 237 172 49 191 197 178 53 83 819 23 75 22 226 185 146 182 198 197 210 ]
T [ 344 261 231 196 336 740 527 49 33 897 888 44 19 52 95 195 320 336 268 259 318 247 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0480.1 UN0480 1 ZF-C2H2-6 Ciona intestinalis
C2H2
UN0480.2 UN0480 2 ZF-C2H2-6 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: