Detailed information of matrix profile UN0479.1

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Profile summary

Name: ZF-C2H2-35
Matrix ID: UN0479.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H4  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 198 223 122 204 328 30 37 17 558 782 150 120 17 975 8 162 99 86 172 213 304 226 ]
C [ 253 208 267 141 211 35 33 18 46 88 525 734 54 11 6 70 62 64 184 350 204 242 ]
G [ 261 235 154 87 189 14 822 956 178 94 95 25 846 7 977 676 83 64 464 243 225 248 ]
T [ 289 334 457 568 272 922 107 9 218 36 231 121 83 7 9 91 756 786 180 195 267 284 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0479.1 UN0479 1 ZF-C2H2-35 Ciona intestinalis
C2H2
UN0479.2 UN0479 2 ZF-C2H2-35 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: