Detailed information of matrix profile UN0479.1

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Profile summary

Name: ZF-C2H2-35
Matrix ID: UN0479.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H4  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 284 267 195 180 786 756 91 9 7 83 121 231 36 218 9 107 922 272 568 457 334 289 ]
C [ 248 225 243 464 64 83 676 977 7 846 25 95 94 178 956 822 14 189 87 154 235 261 ]
G [ 242 204 350 184 64 62 70 6 11 54 734 525 88 46 18 33 35 211 141 267 208 253 ]
T [ 226 304 213 172 86 99 162 8 975 17 120 150 782 558 17 37 30 328 204 122 223 198 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0479.1 UN0479 1 ZF-C2H2-35 Ciona intestinalis
C2H2
UN0479.2 UN0479 2 ZF-C2H2-35 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: