Detailed information of matrix profile UN0478.1

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Profile summary

Name: ZF-C2H2-15
Matrix ID: UN0478.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K3  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 210 173 165 197 138 178 93 20 27 10 17 14 23 81 134 186 210 205 218 211 ]
C [ 264 223 394 321 244 399 88 922 11 917 25 872 45 251 149 165 191 217 249 246 ]
G [ 315 366 229 196 311 101 547 17 146 24 58 14 20 76 333 168 206 210 255 236 ]
T [ 210 238 212 287 307 322 272 41 815 48 900 99 911 591 384 481 393 369 278 307 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0478.1 UN0478 1 ZF-C2H2-15 Ciona intestinalis
C2H2
UN0478.2 UN0478 2 ZF-C2H2-15 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: