Detailed information of matrix profile UN0478.1

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Profile summary

Name: ZF-C2H2-15
Matrix ID: UN0478.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K3  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 307 278 369 393 481 384 591 911 99 900 48 815 41 272 322 307 287 212 238 210 ]
C [ 236 255 210 206 168 333 76 20 14 58 24 146 17 547 101 311 196 229 366 315 ]
G [ 246 249 217 191 165 149 251 45 872 25 917 11 922 88 399 244 321 394 223 264 ]
T [ 211 218 205 210 186 134 81 23 14 17 10 27 20 93 178 138 197 165 173 210 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0478.1 UN0478 1 ZF-C2H2-15 Ciona intestinalis
C2H2
UN0478.2 UN0478 2 ZF-C2H2-15 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: