Detailed information of matrix profile UN0476.1

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Profile summary

Name: ZF-C2H2-1
Matrix ID: UN0476.1
Class: C2H2
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K9  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 542 518 89 324 263 423 211 972 4 4 934 55 126 140 415 294 344 290 201 253 ]
C [ 78 98 37 61 341 99 362 3 21 7 4 77 99 265 401 269 127 368 432 325 ]
G [ 246 238 110 587 41 114 40 12 967 7 12 746 678 469 97 251 362 174 105 163 ]
T [ 134 146 764 28 354 365 387 12 8 982 50 123 97 126 86 186 168 169 263 259 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0476.1 UN0476 1 ZF-C2H2-1 Ciona intestinalis
C2H2
UN0476.2 UN0476 2 ZF-C2H2-1 Ciona intestinalis
C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: