Detailed information of matrix profile UN0474.1

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Profile summary

Name: xBP-c
Matrix ID: UN0474.1
Class: Basic
Family: XBP-1-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 237 249 273 255 270 241 221 753 12 967 5 19 15 237 488 166 217 257 252 252 ]
C [ 260 257 246 262 224 171 126 205 892 7 982 17 27 387 99 345 397 309 290 284 ]
G [ 259 254 247 254 266 346 390 26 13 22 5 957 9 298 153 189 152 212 224 218 ]
T [ 245 240 235 230 240 242 262 16 83 4 8 7 950 78 259 300 234 223 234 246 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0474.1 UN0474 1 xBP-c Ciona intestinalis
XBP-1-related Basic
UN0474.2 UN0474 2 xBP-c Ciona intestinalis
XBP-1-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: