Detailed information of matrix profile UN0474.1

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Profile summary

Name: xBP-c
Matrix ID: UN0474.1
Class: Basic
Family: XBP-1-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 246 234 223 234 300 259 78 950 7 8 4 83 16 262 242 240 230 235 240 245 ]
C [ 218 224 212 152 189 153 298 9 957 5 22 13 26 390 346 266 254 247 254 259 ]
G [ 284 290 309 397 345 99 387 27 17 982 7 892 205 126 171 224 262 246 257 260 ]
T [ 252 252 257 217 166 488 237 15 19 5 967 12 753 221 241 270 255 273 249 237 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0474.1 UN0474 1 xBP-c Ciona intestinalis
XBP-1-related Basic
UN0474.2 UN0474 2 xBP-c Ciona intestinalis
XBP-1-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: