Detailed information of matrix profile UN0472.1

  1. Home
  2. Matrix > UN0472.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: xBP-a
Matrix ID: UN0472.1
Class: Basic
Family: XBP-1-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 281 329 481 372 148 139 505 9 985 3 18 9 156 594 126 148 326 270 305 314 ]
C [ 176 158 107 112 142 71 336 853 3 989 8 8 635 69 326 553 248 217 173 223 ]
G [ 241 205 122 224 510 646 28 94 9 2 969 4 181 143 186 124 182 125 134 166 ]
T [ 303 308 290 292 201 143 131 43 3 6 5 978 28 194 363 175 243 388 388 297 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0472.1 UN0472 1 xBP-a Ciona intestinalis
XBP-1-related Basic
UN0472.2 UN0472 2 xBP-a Ciona intestinalis
XBP-1-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: