Detailed information of matrix profile UN0472.1

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Profile summary

Name: xBP-a
Matrix ID: UN0472.1
Class: Basic
Family: XBP-1-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 297 388 388 243 175 363 194 28 978 5 6 3 43 131 143 201 292 290 308 303 ]
C [ 166 134 125 182 124 186 143 181 4 969 2 9 94 28 646 510 224 122 205 241 ]
G [ 223 173 217 248 553 326 69 635 8 8 989 3 853 336 71 142 112 107 158 176 ]
T [ 314 305 270 326 148 126 594 156 9 18 3 985 9 505 139 148 372 481 329 281 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0472.1 UN0472 1 xBP-a Ciona intestinalis
XBP-1-related Basic
UN0472.2 UN0472 2 xBP-a Ciona intestinalis
XBP-1-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: