Detailed information of matrix profile UN0467.1

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Profile summary

Name: Prox-a
Matrix ID: UN0467.1
Class: Homeo
Family: HD-PROS
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2W9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 287 307 318 286 238 130 61 31 19 898 961 14 861 217 251 170 207 221 238 275 ]
C [ 225 214 219 296 204 299 619 85 212 9 12 10 16 432 103 320 297 257 259 266 ]
G [ 263 264 264 158 285 100 86 42 61 86 18 969 86 100 367 170 179 216 218 227 ]
T [ 225 215 200 260 273 470 234 841 708 6 8 7 37 251 280 341 316 306 285 232 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0467.1 UN0467 1 Prox-a Ciona intestinalis
HD-PROS Homeo
UN0467.2 UN0467 2 Prox-a Ciona intestinalis
HD-PROS Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: