Detailed information of matrix profile UN0465.1

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Profile summary

Name: Pknox
Matrix ID: UN0465.1
Class: Homeo
Family: TALE-type
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 226 234 231 333 248 389 208 118 34 14 123 7 881 271 254 206 237 218 208 225 ]
C [ 248 211 211 254 344 176 267 677 44 4 34 969 35 245 257 278 232 247 281 261 ]
G [ 254 276 349 230 180 281 294 122 6 974 15 16 37 256 221 223 268 254 235 239 ]
T [ 273 280 209 183 227 154 231 84 917 8 827 8 47 227 268 293 262 282 276 275 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0465.1 UN0465 1 Pknox Ciona intestinalis
TALE-type Homeo
UN0465.2 UN0465 2 Pknox Ciona intestinalis
TALE-type Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: