Detailed information of matrix profile UN0465.1

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Profile summary

Name: Pknox
Matrix ID: UN0465.1
Class: Homeo
Family: TALE-type
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 275 276 282 262 293 268 227 47 8 827 8 917 84 231 154 227 183 209 280 273 ]
C [ 239 235 254 268 223 221 256 37 16 15 974 6 122 294 281 180 230 349 276 254 ]
G [ 261 281 247 232 278 257 245 35 969 34 4 44 677 267 176 344 254 211 211 248 ]
T [ 225 208 218 237 206 254 271 881 7 123 14 34 118 208 389 248 333 231 234 226 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0465.1 UN0465 1 Pknox Ciona intestinalis
TALE-type Homeo
UN0465.2 UN0465 2 Pknox Ciona intestinalis
TALE-type Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: